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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TBL1X, transducin (beta)-like 1X-linked
Sequence ID:NM_001139466
NM_001139467
NM_001139468
NM_005647
Entrez Gene ID:6907
Ensembl ID:ENSG00000101849

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 9651430 - 9686902

 Exon Info From UCSC:
NM_001139466
NM_001139467
NM_001139468
NM_005647

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5496758Full LengthBC032708transducin (beta)-like 1X-linked
6378852Full LengthBC052304transducin (beta)-like 1X-linked

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005638  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001139466 NP_001132938    
NM_001139467 NP_001132939    
NM_001139468 NP_001132940    
NM_005647 NP_005638 O60907 WD40
LisH

Related Sequences

 
mRNAGenPeptSwissProt
BC032708 AAH32708 O60907
BC052304 AAH52304 O60907
AB209608 BAD92845 Q59F53
AK289409 BAF82098 O60907
AK290962 BAF83651 O60907
Y12781 CAA73319 O60907

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TBL1X NP_001132938 M.musculus Tbl1x 21372 Gene Info NP_065626 95
R.norvegicus Tbl1x 302711   NP_001100434 95
A.gambiae AgaP_AGAP007739 1278226   XP_317781 79
D.melanogaster ebi 33212   NP_477329 73
S.cerevisiae SIF2 852399   NP_009661 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)