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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CACNA1B, calcium channel, voltage-dependent, N type, alpha 1B subunit
Sequence ID:NM_000718
NM_001243812
Entrez Gene ID:774
Ensembl ID:ENSG00000148408

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 140918106 - 141019067


Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000709  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000718 NP_000709 Q00975 Ion_trans
NM_001243812 NP_001230741    

Related Sequences

 
mRNAGenPeptSwissProt
M94172 AAA51897 Q00975
M94173 AAA51898 Q00975
AB209467 BAD92704 Q59FJ3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CACNA1B NP_000709 M.musculus Cacna1b 12287 Gene Info NP_001035993 93
R.norvegicus Cacna1b 257648   NP_671482 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)