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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. GBGT1, globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
Sequence ID:NM_021996
Entrez Gene ID:26301
Ensembl ID:ENSG00000148288

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.13-q34.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 136028853 - 136039298

NM_021996 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
31309136028341136029647
13101444136030564136030698
14451480136031287136031322
14811531136031401136031451
15321597136036853136036918
15981788136037728136037918
17891949136039140136039300

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5223113Full LengthBC032499globoside alpha-1,3-N-acetylgalactosaminyltransferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_068836  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021996 NP_068836 Q8N5D6 Glyco_transf_6

Related Sequences

 
mRNAGenPeptSwissProt
BC032499 AAH32499 Q8N5D6
AY358175 AAQ88542 Q8N5D6
AK074639 BAC11106 Q8N5D6
AK291498 BAF84187 Q8N5D6
AK314097 BAG36792 Q8N5D6
AK303825 BAH14061 B7Z8S5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GBGT1 NP_068836 M.musculus Gbgt1 227671 Gene Info NP_631936 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)