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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PRRC2B, Proline-rich coiled-coil 2B
Sequence ID:NM_013318
Entrez Gene ID:84726
Ensembl ID:ENSG00000130723

Database Links

UniGeneEntrez GeneEnsembl GeneDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 134353924 - 134375581

 Exon Info From UCSC:
NM_013318

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3546354IncompleteBC002969HLA-B associated transcript 2-like

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013318 NP_037450 Q5JSZ5  

Related Sequences

 
mRNAGenPeptSwissProt
BC002872 AAH02872 Q9BU62
BC002969 AAH02969 Q9BU09
BC012289 AAH12289 Q5JSZ5
AY700780 AAU10087 Q5JSZ5
AB011087 BAA25441 Q5JSZ5
AK026162 BAB15380 Q5JSZ5
AK303507 BAG64539 B4E0S7
AK304849 BAG65589 B4E3S7
CR749818 CAH18678 Q5JSZ5
CR933661 CAI45959 Q5H9R5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PRRC2B NP_037450 M.musculus Prrc2b 227723 Gene Info NP_001153106 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)