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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. WDR34, WD repeat domain 34
Sequence ID:NM_052844
Entrez Gene ID:89891
Ensembl ID:ENSG00000119333

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 131398127 - 131403158

NM_052844 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1322131395939131396260
323480131396504131396661
481713131396967131397199
714881131397370131397537
882991131397936131398045
9921149131398559131398716
11501259131399196131399305
12601508131402969131403217
15091818131418819131419128

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3161070Full LengthBC011874WD repeat domain 34
3535294IncompleteBC001614WD repeat domain 34

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_443076  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_052844 NP_443076 Q96EX3 WD40

Related Sequences

 
mRNAGenPeptSwissProt
BC001614 AAH01614 Q96EX3
BC011874 AAH11874 Q96EX3
AK302098 BAG63480 B4DXR8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens WDR34 NP_443076 R.norvegicus Wdr34 296618   NP_001005542 86
M.musculus Wdr34 71820 Gene Info NP_001008498 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)