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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CERCAM, cerebral endothelial cell adhesion molecule
Sequence ID:NM_016174
Entrez Gene ID:51148
Ensembl ID:ENSG00000167123

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 131185183 - 131198184

 Exon Info From UCSC:
NM_016174

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6672104Full LengthBC098432cerebral endothelial cell adhesion molecule
40116832Full LengthBC119698cerebral endothelial cell adhesion molecule
40116834Full LengthBC119699cerebral endothelial cell adhesion molecule
3028747IncompleteBC011811cerebral endothelial cell adhesion molecule
6185561IncompleteBC108698cerebral endothelial cell adhesion molecule

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057258  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016174 NP_057258 Q5T4B2 Glyco_transf_25

Related Sequences

 
mRNAGenPeptSwissProt
AF177203 AAD51367 Q5T4B2
AF218016 AAG17258 Q9HBP2
BC011811 AAH11811 Q5T4B2
BC098432 AAH98432 Q5T4B2
BC108698 AAI08699 Q5T4B2
BC119698 AAI19699 Q5T4B2
BC119699 AAI19700 Q5T4B2
AB040935 BAA96026 Q5T4B2
AK074519 BAC11036 Q5T4B2
AK074523 BAC11040 Q5T4B2
AK297929 BAG60246 B4DNI4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CERCAM NP_057258 R.norvegicus Cercam 296616   NP_001011962 86
M.musculus Cercam 99151 Gene Info NP_997181 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)