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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LRSAM1, Leucine rich repeat and sterile alpha motif containing 1
Sequence ID:NM_138361
NM_001005373
NM_001190723
NM_001005374
RefSeqGene ID:NG_032008
Entrez Gene ID:90678
Ensembl ID:ENSG00000148356

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q33.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 130265436 - 130265778

 Exon Info From UCSC:
NM_138361
NM_001005373
NM_001190723
NM_001005374

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2988664Full LengthBC009239leucine rich repeat and sterile alpha motif containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001005374  NP_612370  NP_001005373  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001005373 NP_001005373 Q6UWE0 LRR_1
SAM_2
NM_001005374 NP_001005374 Q6UWE0 LRR_1
SAM_2
NM_001190723 NP_001177652    
NM_138361 NP_612370 Q6UWE0 LRR_1
SAM_2

Related Sequences

 
mRNAGenPeptSwissProt
BC009239 AAH09239 Q6UWE0
AY358830 AAQ89189 Q6UWE0
AK056203 BAB71119 Q6UWE0
AK056305 BAB71144 Q6UWE0
AK091589 BAC03703 Q6UWE0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LRSAM1 NP_001005373 R.norvegicus Lrsam1 311866   NP_001101303 89
M.musculus Lrsam1 227738 Gene Info NP_955006 88
A.gambiae AgaP_AGAP005053 4576263   XP_001230957 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)