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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. NR5A1, nuclear receptor subfamily 5, group A, member 1
Sequence ID:NM_004959
RefSeqGene ID:NG_008176
Entrez Gene ID:2516
Ensembl ID:ENSG00000136931

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
46XY SEX REVERSAL 3 
PREMATURE OVARIAN FAILURE 7 
SPERMATOGENIC FAILURE 8 

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 127245036 - 127265674

NM_004959 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11770127243514127245283
17711918127253359127253506
19192038127255308127255427
20392664127262368127262993
26652806127265357127265498
28072923127265572127265688
29243095127269527127269698

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5227690Full LengthBC032501nuclear receptor subfamily 5, group A, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004950  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004959 NP_004950 Q13285 Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
U76388 AAB53105 Q13285
BC032501 AAH32501 Q13285
EU446475 ABZ92004  
JF432187 ADZ15404  
HQ692856 ADZ17367 F1D8R8
HQ709184 ADZ17391 F1DAM0
AB307718 BAH02309 B6ZGU8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NR5A1 NP_004950 M.musculus Nr5a1 26423 Gene Info NP_620639 94
R.norvegicus Nr5a1 83826   XP_002729205 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)