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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. KLHL20, kelch-like 20 (Drosophila)
Sequence ID:NM_014458
Entrez Gene ID:27252
Ensembl ID:ENSG00000076321

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, skin, soft tissue, spleen, stem cell, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 173684138 - 173754646

 Exon Info From UCSC:
NM_014458

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5221643Full LengthBC063418kelch-like 20 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055273  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014458 NP_055273   BTB
Kelch_1
BACK

Related Sequences

 
mRNAGenPeptSwissProt
BC005253 AAH05253 Q9BS75
BC063418 AAH63418 Q9Y2M5
AB026190 BAA77027 Q9Y2M5
AK001430 BAG50912 Q9Y2M5
AK300755 BAG62422 B4DUR0
AJ844466 CAH59617 Q9Y2M5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KLHL20 NP_055273 M.musculus Klhl20 226541 Gene Info NP_001034571 100
R.norvegicus Klhl20 304920   NP_001100662 100
D.melanogaster dbo 53556   NP_524989 81
A.gambiae KLHDB_ANOGA 1271172   XP_309921 80
C.elegans R12E2.1 172012   NP_491322 61

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)