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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TNFSF8, tumor necrosis factor (ligand) superfamily, member 8
Sequence ID:NM_001244
NM_001252290
Entrez Gene ID:944
Ensembl ID:ENSG00000106952

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 117664205 - 117664893

Transcript StartTranscript EndChromosomal Start Chromosomal End
11482117665123117666604
14831554117668107117668178
15551597117680375117680417
15981979117692388117692769

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7939475Full LengthBC093630tumor necrosis factor (ligand) superfamily, member 8
8327407Full LengthBC111939tumor necrosis factor (ligand) superfamily, member 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001235  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001244 NP_001235 P32971 TNF
NM_001252290 NP_001239219    

Related Sequences

 
mRNAGenPeptSwissProt
L09753 AAA74594 P32971
BC093630 AAH93630 P32971
Q52M88
BC111939 AAI11940 Q52M88
AK313619 BAG36381 Q52M88

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TNFSF8 NP_001235 M.musculus Tnfsf8 21949 Gene Info NP_033429 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)