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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RGS3, regulator of G-protein signaling 3
Sequence ID:NM_017790
NM_021106
NM_130795
NM_134427
NM_144488
NM_144489
RefSeqGene ID:NG_029512
Entrez Gene ID:5998
Ensembl ID:ENSG00000138835

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal medulla, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:9q32Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 116342939 - 116344522

 Exon Info From UCSC:
NM_017790
NM_021106
NM_130795
NM_134427
NM_144488
NM_144489

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5175121Full LengthBC042555regulator of G-protein signaling 3
4589325IncompleteBC019039regulator of G-protein signaling 3
4819528IncompleteBC018072regulator of G-protein signaling 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_652760  NP_652759  NP_060260  NP_602299  NP_066929  NP_570613  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017790 NP_060260   C2
PDZ
NM_021106 NP_066929   RGS
NM_130795 NP_570613   PDZ
RGS
NM_134427 NP_602299   RGS
NM_144488 NP_652759 P49796 C2
PDZ
RGS
NM_144489 NP_652760   RGS

Related Sequences

 
mRNAGenPeptSwissProt
AF006609 AAB62725  
U27655 AAC50394 P49796
BC018072 AAH18072 Q8WVE9
BC019039 AAH19039 Q8WV02
BC042555 AAH42555 P49796
AF463495 AAL68829 P49796
AF493927 AAM12641 P49796
AF493941 AAM12655 P49796
AF490838 AAM33253 Q8NFN6
AF490839 AAM33254 P49796
AF490840 AAM33255 P49796
AY585192 AAT79495 P49796
AK000377 BAA91125 Q9NX91
AK054584 BAB70766 Q96NV5
AK074977 BAC11328 P49796
AK125094 BAC86049 Q6ZV17
AK128127 BAC87285 P49796
AK222888 BAD96608 Q53GP3
AK289666 BAF82355 P49796
AK096840 BAG53374 B3KUB2
AK123387 BAG53899 B3KVT7
AK125059 BAG54130 B3KWG8
AK301515 BAG63021 B4DWF9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RGS3 NP_652759 R.norvegicus Rgs3 54293   NP_062213 84
M.musculus Rgs3 50780 Gene Info NP_599018 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)