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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HABP4, Hyaluronan binding protein 4
Sequence ID:NM_014282
Entrez Gene ID:22927
Ensembl ID:ENSG00000130956

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q22.3-q31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 99212486 - 99252787

NM_014282 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14979921241399212909
4986609922066099220822
6618229922761899227779
8238919922799199228059
8929759923329299233375
97611479924674399246914
114813339925037099250555
133426879925226399253616

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3502216Full LengthBC018788hyaluronan binding protein 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055097  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014282 NP_055097 Q5JVS0 HABP4_PAI-RBP1

Related Sequences

 
mRNAGenPeptSwissProt
U77327 AAC31117 Q5JVS0
AF241831 AAF62546 Q5JVS0
BC018788 AAH18788 Q5JVS0
AK055161 BAG51477 B3KNW5
AK091242 BAG52315 B3KRA3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HABP4 NP_055097 M.musculus Habp4 56541 Gene Info NP_064370 87
R.norvegicus Habp4 361196   NP_001073409 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)