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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OSTF1, Osteoclast stimulating factor 1
Sequence ID:NM_012383
Entrez Gene ID:26578
Ensembl ID:ENSG00000134996

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q13-q21.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 77703453 - 77762114

NM_012383 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12457770339777703641
2462927773241977732465
2933437774248477742534
3444077774549377745556
4084617774668577746738
4625697774820977748316
5706197774926177749310
6206987775245377752531
6997977775574977755847
79813127776159877762112

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4052054Full LengthBC007459osteoclast stimulating factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036515  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012383 NP_036515 Q92882 SH3_1
Ank

Related Sequences

 
mRNAGenPeptSwissProt
U63717 AAB06396 Q92882
BC007459 AAH07459 Q92882
HQ448363 ADQ32843  
AK222596 BAD96316 Q92882
AK291511 BAF84200 A8K646

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OSTF1 NP_036515 R.norvegicus Ostf1 259275   NP_683690 96
M.musculus Ostf1 20409 Gene Info NP_059071 96
C.elegans Y106G6H.14 172926   NP_492738 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)