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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RORB, RAR-related orphan receptor B
Sequence ID:NM_006914
Entrez Gene ID:6096
Ensembl ID:ENSG00000198963

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 77245195 - 77300534

NM_006914 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16487711225177112898
6497347724519777245282
7358767724954677249687
87712787725732977257730
127914007727553277275653
140115337727738977277521
153416417728040377280510
164217527728270677282816
175318657728670477286816
186636027730037877302114

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6141868Full LengthBC051830RAR-related orphan receptor B
7939617Full LengthBC093772RAR-related orphan receptor B
7939619Full LengthBC093774RAR-related orphan receptor B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_008845  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006914 NP_008845 Q92753 Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
BC051830 AAH51830 Q92753
Q58EY0
BC093772 AAH93772 Q92753
Q58EY0
BC093774 AAH93774 Q92753
Q58EY0
EU446652 ABZ92181  
HQ709186 ADZ17393 Q58EY0
AK313431 BAG36222 Q58EY0
AB307695 BAH02286 B6ZGS5
Y08639 CAA69929 Q92753

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RORB NP_008845 M.musculus Rorb 225998 Gene Info NP_666207 98
R.norvegicus Rorb 309288   XP_002728915 98
A.gambiae AgaP_AGAP009002 1279961   XP_319750 47
D.melanogaster Hr46 36073   NP_788303 41
C.elegans nhr-23 172460   NP_001032971 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)