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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RCSD1, RCSD domain containing 1
Sequence ID:NM_052862
Entrez Gene ID:92241
Ensembl ID:ENSG00000198771

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 167599329 - 167675486

NM_052862 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1193167599473167599665
194295167653136167653237
296385167654657167654746
386457167659285167659356
458661167663335167663538
6621405167666335167667078
14062990167673900167675484

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8069042Full LengthBC101536RCSD domain containing 1
8069068Full LengthBC101562RCSD domain containing 1
5485290IncompleteBC098426RCSD domain containing 1
5786871IncompleteBC072399RCSD domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_443094  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_052862 NP_443094 Q6JBY9 RCSD

Related Sequences

 
mRNAGenPeptSwissProt
BC013186 AAH13186 Q6JBY9
BC072399 AAH72399 Q6JBY9
BC098426 AAH98426 Q6JBY9
BC101536 AAI01537 Q6JBY9
BC101562 AAI01563 Q6JBY9
BC143428 AAI43429 B7ZKW8
AF545852 AAN52359 Q6JBY9
AY530954 AAS99235 Q6JBY9
AL137762 CAB70910 Q6JBY9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RCSD1 NP_443094 M.musculus Rcsd1 226594 Gene Info NP_848708 65
R.norvegicus Rcsd1 360872   NP_001101819 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)