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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RNF139, ring finger protein 139
Sequence ID:NM_007218
RefSeqGene ID:NG_012158
Entrez Gene ID:11236
Ensembl ID:ENSG00000170881

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
RENAL CARCINOMA, CHROMOPHOBE, SOMATICDIRC2
FLCN
HNF1A
HNF1B
OGG1
VHL

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q24Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 125487113 - 125500141

NM_007218 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1524125487007125487530
5253311125498071125500857

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4550103Full LengthBC021571ring finger protein 139
5748185Full LengthBC064636ring finger protein 139

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009149  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007218 NP_009149 Q8WU17 zf-C3HC4

Related Sequences

 
mRNAGenPeptSwissProt
AF064801 AAC39930 Q8WU17
BC021571 AAH21571 Q8WU17
BC064636 AAH64636 Q8WU17
AK001602 BAG50947 Q8WU17

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RNF139 NP_009149 M.musculus Rnf139 75841 Gene Info NP_780435 94
R.norvegicus Rnf139 315000   NP_001121017 94
D.melanogaster Trc8 43476   NP_733292 46
A.gambiae AgaP_AGAP003666 1274343   XP_313450 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)