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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. UBR5, ubiquitin protein ligase E3 component n-recognin 5
Sequence ID:NM_015902
Entrez Gene ID:51366
Ensembl ID:ENSG00000104517

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 103266131 - 103424917

 Exon Info From UCSC:
NM_015902

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021231Full LengthBC137234ubiquitin protein ligase E3 component n-recognin 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056986  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015902 NP_056986 O95071 HECT
PABP
zf-UBR

Related Sequences

 
mRNAGenPeptSwissProt
AF006010 AAD01259 O95071
U95000 AAF88143 O95071
BC044598 AAH44598 Q49A65
BC137234 AAI37235 O95071
AB020703 BAA74919 O95071
AK002172 BAG51024 B3KML2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens UBR5 NP_056986 M.musculus Ubr5 70790 Gene Info NP_001074828 98
R.norvegicus Ubr5 117060   XP_576252 98
A.gambiae AgaP_AGAP001780 1281389   XP_321295 50
D.melanogaster hyd 41181   NP_524296 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)