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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DECR1, 2,4-dienoyl CoA reductase 1, mitochondrial
Sequence ID:NM_001359
RefSeqGene ID:NG_008042
Entrez Gene ID:1666
Ensembl ID:ENSG00000104325

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 91013704 - 91064227

NM_001359 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12109101357991013788
2114139102935191029553
4144719103113691031193
4725589103131391031399
5597069103313691033283
7078069104906891049167
8078799105495591055027
88010269105707691057222
102710899106390491063966
109012519106406591064226

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8144083Full LengthBC1050802,4-dienoyl CoA reductase 1, mitochondrial
8144085Full LengthBC1050822,4-dienoyl CoA reductase 1, mitochondrial

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001350  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001359 NP_001350 Q16698 EC 1.3.1.34 adh_short

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L26050 AAA67551 Q16698 EC 1.3.1.34
U49352 AAB09423 Q16698 EC 1.3.1.34
BC105080 AAI05081 Q16698 EC 1.3.1.34
BC105082 AAI05083 Q16698 EC 1.3.1.34
AK300069 BAH13204 B7Z6B8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DECR1 NP_001350 M.musculus Decr1 67460 Gene Info NP_080448 82
R.norvegicus Decr1 117543   NP_476545 81
C.elegans F53C11.3 179872   NP_506413 53
C.elegans T05C12.3 174316   NP_495714 49
C.elegans W01C9.4 189090   NP_495805 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)