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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LYN, v-yes-1 Yamaguchi sarcoma viral related oncogene homolog
Sequence ID:NM_001111097
NM_002350
RefSeqGene ID:NG_029593
Entrez Gene ID:4067
Ensembl ID:ENSG00000254087

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 56864654 - 56923130

 Exon Info From UCSC:
NM_001111097
NM_002350

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8992172Full LengthBC126456v-yes-1 Yamaguchi sarcoma viral related oncogene homolog
8992174Full LengthBC126458v-yes-1 Yamaguchi sarcoma viral related oncogene homolog
30915399Full LengthBC075001v-yes-1 Yamaguchi sarcoma viral related oncogene homolog
30915611Full LengthBC075002v-yes-1 Yamaguchi sarcoma viral related oncogene homolog
30332044IncompleteBC059394v-yes-1 Yamaguchi sarcoma viral related oncogene homolog
30334379IncompleteBC068551v-yes-1 Yamaguchi sarcoma viral related oncogene homolog

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002341  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001111097 NP_001104567      
NM_002350 NP_002341 P07948 EC 2.7.10.2 SH2
SH3_1
Pkinase_Tyr

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M16038 AAA59540 P07948 EC 2.7.10.2
M79321 AAB50019 P07948 EC 2.7.10.2
BC059394 AAH59394 Q6NUK7  
BC068551 AAH68551 Q6NUK7  
BC075001 AAH75001 P07948 EC 2.7.10.2
BC075002 AAH75002 P07948 EC 2.7.10.2
BC126456 AAI26457 P07948 EC 2.7.10.2
BC126458 AAI26459 P07948 EC 2.7.10.2
AK290494 BAF83183 A8K379  
AK298677 BAG60841 B4DQ79  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LYN NP_002341 M.musculus Lyn 17096 Gene Info NP_001104566 96
R.norvegicus Lyn 81515   NP_110484 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta