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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ATP6V1H, ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H
Sequence ID:NM_015941
NM_213619
NM_213620
Entrez Gene ID:51606
Ensembl ID:ENSG00000047249

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 54628229 - 54755801

 Exon Info From UCSC:
NM_015941
NM_213619
NM_213620

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4646010Full LengthBC025275ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057025  NP_998785  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015941 NP_057025 Q9UI12 V-ATPase_H
NM_213619 NP_998784    
NM_213620 NP_998785 Q9UI12 V-ATPase_H

Related Sequences

 
mRNAGenPeptSwissProt
AF132945 AAD27720 Q9UI12
AF112204 AAF17192 Q9UI12
AF298777 AAG22809 Q9UI12
AF113222 AAG39293 Q9UI12
BC025275 AAH25275 Q9UI12
AF125105 AAL75942 Q8TF11
AK022345 BAG51072 Q9UI12
AK098305 BAG53609 B3KUZ7
AK303229 BAG64316 B4E054

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP6V1H NP_998784 M.musculus Atp6v1h 108664 Gene Info NP_598587 99
R.norvegicus Atp6v1h 297797   NP_001013951 98
A.gambiae AgaP_AGAP009486 1271424   XP_310211 57
D.melanogaster VhaSFD 34997   NP_523585 56
C.elegans vha-15 180534   NP_508412 54
A.thaliana AT3G42050 823170   NP_189791 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)