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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PLAT, Plasminogen activator, tissue
Sequence ID:NM_000930
NM_033011
RefSeqGene ID:NG_023264
Entrez Gene ID:5327
Ensembl ID:ENSG00000104368

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 42033513 - 42046584

 Exon Info From UCSC:
NM_000930
NM_033011

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3161005Full LengthBC007231plasminogen activator, tissue
3163742Full LengthBC013968plasminogen activator, tissue
3618149Full LengthBC002795plasminogen activator, tissue
3637273Full LengthBC018636plasminogen activator, tissue
30528441Full LengthBC095403plasminogen activator, tissue

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000921  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_000930 NP_000921 P00750 EC 3.4.21.68 EGF
fn1
Kringle
Trypsin
NM_033011 NP_127509      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M18182 AAA36800 P00750 EC 3.4.21.68
M15518 AAA60111 P00750 EC 3.4.21.68
BC002795 AAH02795 P00750 EC 3.4.21.68
BC007231 AAH07231 P00750 EC 3.4.21.68
BC013968 AAH13968 P00750 EC 3.4.21.68
BC018636 AAH18636 P00750 EC 3.4.21.68
BC095403 AAH95403 P00750 EC 3.4.21.68
AF260825 AAK11956 P00750 EC 3.4.21.68
AY221101 AAO34406 P00750 EC 3.4.21.68
BT007060 AAP35709 P00750 EC 3.4.21.68
DQ893499 ABM84425    
DQ896487 ABM87486    
EU831516 ACE86435    
EU831423 ACE87110    
D01096 BAA00881 P00750 EC 3.4.21.68
AK289387 BAF82076 P00750 EC 3.4.21.68
AK290575 BAF83264 P00750 EC 3.4.21.68
AK313342 BAG36145 P00750 EC 3.4.21.68
AK297738 BAG60088 B4DN26  
AK297937 BAG60253 B4DNJ1  
AK299205 BAG61245 B4DRD3  
AK300984 BAG62604 B4DV92  
A03776 CAA00299 P00750 EC 3.4.21.68
A07197 CAA00642 P00750 EC 3.4.21.68
V00570 CAA23833 P00750 EC 3.4.21.68
X07393 CAA30302 P00750 EC 3.4.21.68
X13097 CAA31489 P00750 EC 3.4.21.68
BX641021 CAI46259 Q5HYM8  
FM956488 CAX11668 B8ZX62  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PLAT NP_000921 R.norvegicus Plat 25692   NP_037283 82
M.musculus Plat 18791 Gene Info NP_032898 81

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta