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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CCT3, Chaperonin containing TCP1, subunit 3 (gamma)
Sequence ID:NM_005998
NM_001008800
Entrez Gene ID:7203
Ensembl ID:ENSG00000163468

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 156278759 - 156308072

 Exon Info From UCSC:
NM_005998
NM_001008800

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2820063Full LengthBC006501chaperonin containing TCP1, subunit 3 (gamma)
3534941Full LengthBC008019chaperonin containing TCP1, subunit 3 (gamma)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005989  NP_001008800  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001008800 NP_001008800   Cpn60_TCP1
NM_005998 NP_005989 P49368 Cpn60_TCP1

Related Sequences

 
mRNAGenPeptSwissProt
U17104 AAC50068 P49368
BC006501 AAH06501 P49368
BC008019 AAH08019 P49368
AY524046 AAS94255 Q2TU64
DQ893014 ABM83940  
DQ896259 ABM87258  
AB208882 BAD92119 Q59H77
AK126400 BAG54323 B3KX11
AK293477 BAG56968 P49368
AK300765 BAG62430 B4DUR8
AK315923 BAH14294 B4DUR8
AK316387 BAH14758 B4DUR8
X74801 CAA52808 P49368
AL833197 CAI46192 P49368

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCT3 NP_005989 R.norvegicus Cct3 295230   NP_954522 98
M.musculus Cct3 12462 Gene Info NP_033966 97
A.gambiae AgaP_AGAP002759 1273209   XP_312164 73
D.melanogaster Cctgamma 42029   NP_732167 70
N.crassa NCU01843 3872774   XP_956627 65
S.pombe cct3 2540567   NP_595810 64
C.elegans cct-3 173581   NP_494218 63
A.thaliana AT5G26360 832705   NP_198008 62
S.cerevisiae CCT3 853438   NP_012520 61
P.falciparum PFL1425w 811337   XP_001350691 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)