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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PPP2CB, protein phosphatase 2, catalytic subunit, beta isozyme
Sequence ID:NM_001009552
NM_004156
Entrez Gene ID:5516
Ensembl ID:ENSG00000104695

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8p12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 30643750 - 30669938

Transcript StartTranscript EndChromosomal Start Chromosomal End
197153064312630643822
7168343064871230648830
8359963065143230651593
99710863065170730651796
108712603065509630655269
126114703065706130657270
147119873066983530670351

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4454972Full LengthBC012022protein phosphatase 2 (formerly 2A), catalytic subunit, beta isoform

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001009552  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001009552 NP_001009552 P62714 EC 3.1.3.16 Metallophos

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
J03805 AAB38020 P62714 EC 3.1.3.16
BC012022 AAH12022 P62714 EC 3.1.3.16
AF444006 AAL35904 Q8WZ56  
BT019526 AAV38333 Q5U0I7  
AK091875 BAG52434 B3KRM2  
X12656 CAA31183 P62714 EC 3.1.3.16
CR541747 CAG46547 P62714 EC 3.1.3.16

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPP2CB NP_001009552 M.musculus Ppp2cb 19053 Gene Info NP_059070 100
R.norvegicus Ppp2cb 24673   NP_058736 100
D.melanogaster mts 45959   NP_476805 94
A.gambiae AgaP_AGAP010172 1279592   XP_319345 93
C.elegans let-92 178117   NP_502247 90
S.pombe ppa1 2542052   NP_593842 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)