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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ELP3, elongator acetyltransferase complex subunit 3
Sequence ID:NM_018091
Entrez Gene ID:55140
Ensembl ID:ENSG00000134014

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8p21.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 27950656 - 28047611

 Exon Info From UCSC:
NM_018091

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3457039Full LengthBC001240elongation protein 3 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060561  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_018091 NP_060561 Q9H9T3 EC 2.3.1.48 Acetyltransf_1
Radical_SAM

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC001240 AAH01240 Q9H9T3 EC 2.3.1.48
AK001284 BAA91600 Q9H9T3 EC 2.3.1.48
AK022626 BAB14138 Q9H9T3 EC 2.3.1.48
AK223047 BAD96767 Q9H9T3 EC 2.3.1.48
AK293424 BAG56930 B4DE19  
AK295574 BAG58473 B4DIG1  
AK296475 BAG59116 B4DKA4  
AK298265 BAG60529 B4DPB7  
AK302140 BAG63513 B4DXV1  
AK315985 BAH14356 B4DE19  
AK316053 BAH14424 B4DKA4  
AL834273 CAD38948 Q9H9T3 EC 2.3.1.48
BX648011 CAH10573 Q9H9T3 EC 2.3.1.48
AM392633 CAL37511    

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ELP3 NP_060561 R.norvegicus LOC100362548 100362548   XP_002728336 97
M.musculus Elp3 74195 Gene Info NP_083087 96
A.gambiae AgaP_AGAP008300 1277684   XP_317165 83
D.melanogaster Elp3 33649   NP_608834 83
C.elegans elpc-3 179669   NP_506055 80
S.cerevisiae ELP3 856019   NP_015239 75
S.pombe elp3 2541614   NP_594862 74
A.thaliana ELO3 835098   NP_568725 74
N.crassa NCU01229 3877743   XP_961595 73
P.falciparum PFL1345c 811321   XP_001350675 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)