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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. COL28A1, collagen, type XXVIII, alpha 1
Sequence ID:NM_001037763
Entrez Gene ID:340267
Ensembl ID:ENSG00000215018

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 7398243 - 7575460

 Exon Info From UCSC:
NM_001037763

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9020883Full LengthBC136892collagen, type XXVIII, alpha 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001037763 NP_001032852 Q2UY09  

Related Sequences

 
mRNAGenPeptSwissProt
BC136892 AAI36893 Q2UY09
AJ890451 CAI67595 Q2UY09
AJ890452 CAI67596 Q2UY09
AJ890453 CAI67597 Q2UY09

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COL28A1 NP_001032852 M.musculus Col28a1 213945 Gene Info NP_001032954 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)