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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PTPRN2, protein tyrosine phosphatase, receptor type, N polypeptide 2
Sequence ID:NM_002847
NM_130842
NM_130843
RefSeqGene ID:NG_029966
Entrez Gene ID:5799
Ensembl ID:ENSG00000155093

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q36Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 157331750 - 158334468

 Exon Info From UCSC:
NM_002847
NM_130842
NM_130843

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4375815Full LengthBC071570protein tyrosine phosphatase, receptor type, N polypeptide 2
4811578Full LengthBC034040protein tyrosine phosphatase, receptor type, N polypeptide 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_570857  NP_570858  NP_002838  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002847 NP_002838 Q92932 EC 3.1.3.48 Y_phosphatase
NM_130842 NP_570857     Y_phosphatase
NM_130843 NP_570858     Y_phosphatase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF007555 AAB63600 Q92932 EC 3.1.3.48
U81561 AAB68603 Q9Y4I6  
U66702 AAC50742 Q92932 EC 3.1.3.48
U65065 AAC51643 Q9Y4I9  
BC034040 AAH34040 Q92932 EC 3.1.3.48
BC071570 AAH71570 I6L9F8  
DQ892399 ABM83325    
EU176514 ABW03315    
AB002385 BAA20841 Q92932 EC 3.1.3.48
AL157451 CAB75665 Q9NSR5  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PTPRN2 NP_002838 R.norvegicus Ptprn2 29714   NP_113788 72
M.musculus Ptprn2 19276 Gene Info NP_035345 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)