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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. KCNN3, potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3
Sequence ID:NM_001204087
NM_002249
NM_170782
RefSeqGene ID:NG_016807
Entrez Gene ID:3782
Ensembl ID:ENSG00000143603

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 154680424 - 154842726

 Exon Info From UCSC:
NM_002249
NM_170782

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3619576Full LengthBC042147potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_740752  NP_002240  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001204087 NP_001191016    
NM_002249 NP_002240 Q9UGI6 CaMBD
SK_channel
Ion_trans_2
NM_170782 NP_740752   CaMBD
SK_channel
Ion_trans_2

Related Sequences

 
mRNAGenPeptSwissProt
AF031815 AAC26099 Q9UGI6
BC042147 AAH42147 Q9UGI6
AY049734 AAL10706 Q96DJ3
AF438203 AAL40801 Q9UGI6
AY138900 AAN46636 Q86VF9
AY258142 AAP45947 Q6JXY2
HQ448417 ADQ32897  
Y08263 CAA69590 Q99415
AJ251016 CAB61331 Q9UGI6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens KCNN3 NP_001191016 R.norvegicus Kcnn3 54263   NP_062188 97
M.musculus Kcnn3 140493 Gene Info NP_536714 96
A.gambiae AgaP_AGAP010503 1275242   XP_314474 62
D.melanogaster SK 31456   NP_726986 54
C.elegans F08A10.1 172602   NP_492234 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)