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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SSBP1, single-stranded DNA binding protein 1, mitochondrial
Sequence ID:NM_001256510
NM_001256511
NM_001256512
NM_001256513
NM_003143
NR_046269
Entrez Gene ID:6742
Ensembl ID:ENSG00000106028

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 141438174 - 141450257

Transcript StartTranscript EndChromosomal Start Chromosomal End
135141438175141438209
36102141438923141438989
103163141441968141442028
164304141443360141443500
305392141443701141443788
393481141445295141445383
482628141450110141450256

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3464282Full LengthBC000895single-stranded DNA binding protein 1
30722138Full LengthBC093054single-stranded DNA binding protein 1
4294746IncompleteBC008402single-stranded DNA binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003134  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001256510 NP_001243439    
NM_001256511 NP_001243440    
NM_001256512 NP_001243441    
NM_001256513 NP_001243442    
NM_003143 NP_003134 Q04837 SSB

Related Sequences

 
mRNAGenPeptSwissProt
M94556 AAA36332 Q04837
BC000895 AAH00895 Q04837
BC008402 AAH08402 Q96QL6
BC093054 AAH93054 Q567R6
AF277319 AAK69112 Q04837
DQ893371 ABM84297  
DQ896693 ABM87692  
AK313033 BAG35866 A4D1U3
AK294393 BAH11754 B7Z268

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SSBP1 NP_003134 M.musculus Ssbp1 381760 Gene Info NP_997633 93
R.norvegicus Ssbp1 54304   NP_899157 89
A.gambiae AgaP_AGAP002477 1273482   XP_312461 48
D.melanogaster mtSSB 41968   NP_001034057 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)