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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CNOT4, CCR4-NOT transcription complex, subunit 4
Sequence ID:NM_001008225
NM_001190847
NM_001190848
NM_001190849
NM_001190850
NM_013316
Entrez Gene ID:4850
Ensembl ID:ENSG00000080802

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q22-qterMitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 135046548 - 135099963

 Exon Info From UCSC:
NM_001008225
NM_001190847
NM_001190848
NM_001190849
NM_001190850
NM_013316

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5576434Full LengthBC035590CCR4-NOT transcription complex, subunit 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001008226  NP_037448  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001008225 NP_001008226   RRM_1
NM_001190847 NP_001177776    
NM_001190848 NP_001177777 O95628  
NM_001190849 NP_001177778    
NM_001190850 NP_001177779    
NM_013316 NP_037448   RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
AF091094 AAC72963 O95628
U71267 AAD00179 O95628
U71268 AAD00180 O95628
AF180475 AAF29829 O95628
BC035590 AAH35590 O95628
AK074671 BAC11125 O95628
AK074493 BAG51961 B3KQ99
AK300365 BAH13270 B7Z6I4
AL389980 CAB97536 O95628

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CNOT4 NP_001177778 R.norvegicus Cnot4 312227   NP_001032871 98
M.musculus Cnot4 53621 Gene Info NP_001157885 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)