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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC35B4, solute carrier family 35, member B4
Sequence ID:NM_032826
Entrez Gene ID:84912
Ensembl ID:ENSG00000205060

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q33Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 133978560 - 134001803

NM_032826 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
35743133974090133979830
57445819133981142133981217
58205895133984274133984349
58966005133984903133985012
60066066133986512133986572
60676148133986780133986861
61496198133989556133989605
61996301133991423133991525
63026415133994117133994230
64166816134001426134001826

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4333393Full LengthBC008413solute carrier family 35, member B4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_116215  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_032826 NP_116215 Q969S0 UAA

Related Sequences

 
mRNAGenPeptSwissProt
BC008413 AAH08413 Q969S0
AK027603 BAB55225 Q969S0
AK027726 BAB55325 Q969S0
AB052892 BAB61040 Q969S0
AK075368 BAC11573 Q969S0
AK222874 BAD96594 Q969S0
AJ315497 CAC84567 Q969S0
AJ315498 CAC84568 Q969S0
AJ971941 CAI98963 Q969S0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC35B4 NP_116215 R.norvegicus Slc35b4 296969   NP_001100060 92
M.musculus Slc35b4 58246 Gene Info NP_067410 91
A.gambiae AgaP_AGAP011493 1278374   XP_317807 60
D.melanogaster Efr 31553   NP_572299 55
C.elegans F15B10.1 177424   NP_001040936 43
N.crassa NCU02980 3881491   XP_965367 39
S.pombe SPBC1734.09 2539611   NP_595426 37
S.cerevisiae YEA4 856714   NP_010912 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)