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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. HRNR, hornerin
Sequence ID:XM_003960263
NM_001009931
Entrez Gene ID:388697
Ensembl ID:ENSG00000197915

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 152184557 - 152187033

NM_001009931 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19409152184557152193965
94109572152195591152195753
95739623152196618152196668

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001009931  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001009931 NP_001009931 Q86YZ3 S_100

Related Sequences

 
mRNAGenPeptSwissProt
AY396741 AAR91619 Q5DT20
AB104446 BAC57496 Q86YZ3
AB180729 BAD67177 Q5W8V9
BR000036 FAA00004 Q86YZ3
XM_003960263 XP_003960312  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens HRNR NP_001009931 M.musculus Hrnr 68723 Gene Info NP_598459 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)