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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. TAF6, TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
Sequence ID:NM_005641
NM_139315
NM_001190415
RefSeqGene ID:NG_029454
Entrez Gene ID:6878
Ensembl ID:ENSG00000106290

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 99704701 - 99716927

 Exon Info From UCSC:
NM_005641
NM_139315
NM_001190415

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3905205Full LengthBC018115TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005632  NP_647476  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001190415 NP_001177344    
NM_005641 NP_005632 P49848 TAF
DUF1546
NM_139315 NP_647476 P49848 TAF
DUF1546

Related Sequences

 
mRNAGenPeptSwissProt
L25444 AAA63643 P49848
U31659 AAA84390 P49848
BC018115 AAH18115 P49848
DQ891612 ABM82538  
DQ894804 ABM85730  
AK097781 BAG53526 B3KUR4
AK300005 BAG61823 P49848
CR627390 CAH10485 P49848

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TAF6 NP_001177344 R.norvegicus Taf6 288533   NP_001037690 99
M.musculus Taf6 21343 Gene Info NP_033341 98
D.melanogaster Taf6 40134   NP_524161 50
A.gambiae AgaP_AGAP004254 1274098   XP_313173 47
C.elegans taf-6.1 173498   NP_493919 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)