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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC25A13, solute carrier family 25 (aspartate/glutamate carrier), member 13
Sequence ID:NM_001160210
NM_014251
NR_027662
RefSeqGene ID:NG_012247
Entrez Gene ID:10165
Ensembl ID:ENSG00000004864

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:7q21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 95950841 - 95951546

 Exon Info From UCSC:
NM_001160210
NM_014251

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3604257Full LengthBC006566solute carrier family 25, member 13 (citrin)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055066  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001160210 NP_001153682    
NM_014251 NP_055066 Q9UJS0 efhand
Mito_carr

Related Sequences

 
mRNAGenPeptSwissProt
AF118838 AAD38501 Q9UJS0
BC006566 AAH06566 Q9UJS0
DQ892851 ABM83777  
DQ896098 ABM87097  
AK222864 BAD96584 Q53GR7
AK294629 BAH11828 B7Z2E2
Y17571 CAB62206 Q9UJS0
AJ496569 CAD43091 Q9UJS0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC25A13 NP_055066 M.musculus Slc25a13 50799 Gene Info NP_001171043 96
R.norvegicus Slc25a13 362322   XP_342641 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)