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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EEPD1, endonuclease/exonuclease/phosphatase family domain containing 1
Sequence ID:NM_030636
Entrez Gene ID:80820
Ensembl ID:ENSG00000122547

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p14.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 36193094 - 36341151

NM_030636 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14483619283536193282
44915183619374136194810
151915703627859336278644
157116813632072336320833
168218163632429436324428
181719553632724736327385
195621503633660136336795
215146863633861536341150

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5755727Full LengthBC065518endonuclease/exonuclease/phosphatase family domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_085139  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_030636 NP_085139 Q7L9B9 HHH
Exo_endo_phos

Related Sequences

 
mRNAGenPeptSwissProt
AF161370 AAF28930 Q9P0C9
BC065518 AAH65518 Q7L9B9
AB051493 BAB21797 Q7L9B9
AK027386 BAB55076 Q7L9B9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EEPD1 NP_085139 R.norvegicus Eepd1 315500   NP_001014110 91
M.musculus Eepd1 67484 Gene Info NP_080465 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)