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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ESRP1, Epithelial splicing regulatory protein 1
Sequence ID:NM_017697
NM_001034915
NM_001122826
NM_001122825
NM_001122827
Entrez Gene ID:54845
Ensembl ID:ENSG00000104413

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 95658443 - 95718728

 Exon Info From UCSC:
NM_017697
NM_001034915
NM_001122826
NM_001122825
NM_001122827

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6586195Full LengthBC067098epithelial splicing regulatory protein 1
30527936Full LengthBC099916epithelial splicing regulatory protein 1
4526804IncompleteBC035406RNA binding motif protein 35A
4991420IncompleteBC019932epithelial splicing regulatory protein 1
8327511IncompleteBC112043epithelial splicing regulatory protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_060167  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001034915 NP_001030087    
NM_001122825 NP_001116297    
NM_001122826 NP_001116298    
NM_001122827 NP_001116299    
NM_017697 NP_060167 Q6NXG1 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
BC019932 AAH19932 Q6NXG1
BC067098 AAH67098 Q6NXG1
BC099916 AAH99916 Q6NXG1
BC112043 AAI12044 Q6NXG1
AK000178 BAA90992 Q6NXG1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ESRP1 NP_060167 M.musculus Esrp1 207920 Gene Info NP_918944 97
R.norvegicus Esrp1 500409   NP_001121036 97
A.gambiae AgaP_AGAP011722 1280918   XP_320791 51
C.elegans sym-2 174461   NP_495960 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)