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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SMOC2, SPARC related modular calcium binding 2
Sequence ID:NM_022138
NM_001166412
RefSeqGene ID:NG_032781
Entrez Gene ID:64094
Ensembl ID:ENSG00000112562

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6q27Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 168842030 - 169068671

 Exon Info From UCSC:
NM_022138
NM_001166412

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4826774Full LengthBC028420SPARC related modular calcium binding 2
4826950Full LengthBC047583SPARC related modular calcium binding 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001166412 NP_001159884 Q9H3U7  
NM_022138 NP_071421    

Related Sequences

 
mRNAGenPeptSwissProt
BC028420 AAH28420 Q9H3U7
BC047583 AAH47583 Q9H3U7
AF173892 AAQ13639 Q9H3U7
AF176778 AAQ13656 Q7Z4C9
AB014730 BAB20267 Q9H3U7
AB014737 BAB20274 Q9H3U7
AK056700 BAG51789 Q9H3U7
AK297839 BAG60173 B4DNB1
AK315920 BAH14291 B4DNB1
AJ249902 CAC10353 Q9H3U7
AL832303 CAI46175 Q9H3U7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SMOC2 NP_071421 M.musculus Smoc2 64074 Gene Info NP_071710 95
R.norvegicus Smoc2 292401   NP_001099685 95
A.gambiae AgaP_AGAP007489 1269737   XP_308386 41
D.melanogaster magu 36048   NP_610548 35
C.elegans T04F3.2 179609   NP_505964 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)