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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TTF2, Transcription termination factor, RNA polymerase II
Sequence ID:NM_003594
Entrez Gene ID:8458
Ensembl ID:ENSG00000116830

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 117630949 - 117644763

 Exon Info From UCSC:
NM_003594

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5457833Full LengthBC030058transcription termination factor, RNA polymerase II

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003585  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003594 NP_003585 Q9UNY4 SNF2_N
Helicase_C
zf-GRF

Related Sequences

 
mRNAGenPeptSwissProt
AF073771 AAC64044 Q9UNY4
AF080255 AAD49435 Q9UNY4
BC030058 AAH30058 Q9UNY4
AB209845 BAD93082 Q59EG6
AK291017 BAF83706 Q9UNY4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TTF2 NP_003585 M.musculus Ttf2 74044 Gene Info NP_001013044 72
C.elegans helicase 178681   NP_503548 49
A.gambiae AgaP_AGAP011966 1280703   XP_552266 41
C.elegans helicase 178054   NP_502137 41
C.elegans helicase 172347   NP_001032980 40
D.melanogaster lds 45894   NP_524850 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)