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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. BCLAF1, BCL2-associated transcription factor 1
Sequence ID:NM_001077440
NM_001077441
NM_014739
Entrez Gene ID:9774
Ensembl ID:ENSG00000029363

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q22-q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 136582396 - 136601004

 Exon Info From UCSC:
NM_001077440
NM_001077441
NM_014739

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052801Full LengthBC144281BCL2-associated transcription factor 1
40146802Full LengthBC132780BCL2-associated transcription factor 1
3923680IncompleteBC016682BCL2-associated transcription factor 1
6012257IncompleteBC056894BCL2-associated transcription factor 1
6021719IncompleteBC047687BCL2-associated transcription factor 1
6153817IncompleteBC078160BCL2-associated transcription factor 1
6470751IncompleteBC047887BCL2-associated transcription factor 1
6501081IncompleteBC063846BCL2-associated transcription factor 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001077440 NP_001070908    
NM_001077441 NP_001070909    
NM_014739 NP_055554 Q9NYF8  

Related Sequences

 
mRNAGenPeptSwissProt
AF249273 AAF64304 Q9NYF8
BC016682 AAH16682 Q6DCA8
BC047687 AAH47687 Q9NYF8
BC047887 AAH47887 Q9NYF8
BC056894 AAH56894 Q9NYF8
Q6DCA8
BC063846 AAH63846 Q9NYF8
BC078160 AAH78160 Q6DCA8
BC132780 AAI32781 Q9NYF8
BC144281 AAI44282 Q9NYF8
D79986 BAA11481 Q9NYF8
AK315884 BAF98775 B0AZU3
AK303559 BAH13985 B7Z8J9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BCLAF1 NP_055554 M.musculus Bclaf1 72567 Gene Info NP_001020563 96
R.norvegicus Bclaf1 293017   NP_001041317 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)