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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLVS2, clavesin 2
Sequence ID:NM_001010852
Entrez Gene ID:134829
Ensembl ID:ENSG00000146352

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6q22.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 123317115 - 123385226

NM_001010852 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1310123317581123317890
3111258123318363123319310
12591433123332129123332303
14341544123369766123369876
15451765123376950123377170
17662010123384818123385062

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40025886Full LengthBC101376retinaldehyde binding protein 1-like 2
40025889Full LengthBC101377retinaldehyde binding protein 1-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001010852  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001010852 NP_001010852 Q5SYC1 CRAL_TRIO

Related Sequences

 
mRNAGenPeptSwissProt
BC101376 AAI01377 Q5SYC1
BC101377 AAI01378 Q5SYC1
AK095527 BAG53077 Q5SYC1
AK295158 BAG58172 Q5SYC1
BK006900 DAA06537 Q5SYC1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLVS2 NP_001010852 M.musculus Clvs2 215890 Gene Info NP_780657 98
A.gambiae AgaP_AGAP008133 1277823   XP_317327 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)