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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RARS2, arginyl-tRNA synthetase 2, mitochondrial
Sequence ID:NM_020320
RefSeqGene ID:NG_008601
Entrez Gene ID:57038
Ensembl ID:ENSG00000146282

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
PONTOCEREBELLAR HYPOPLASIA, TYPE 6 

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q16.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 87981463 - 88299673

 Exon Info From UCSC:
NM_020320

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3613406Full LengthBC010420arginyl-tRNA synthetase 2, mitochondrial
4685309IncompleteBC105784arginyl-tRNA synthetase-like

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064716  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_020320 NP_064716 Q5T160 EC 6.1.1.19 tRNA-synt_1d
tRNA-synt_1d_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF118086 AAF22030 Q9UHS7  
BC010420 AAH10420 Q5T160 EC 6.1.1.19
AK023550 BAB14608 Q5T160 EC 6.1.1.19
AK315669 BAG38034 Q5T160 EC 6.1.1.19

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RARS2 NP_064716 M.musculus Rars2 109093 Gene Info NP_852071 87
R.norvegicus Rars2 297969   NP_001100113 86
S.cerevisiae YDR341C 851942   NP_010628 43
S.pombe mrs1 2540548   NP_596077 41
D.melanogaster CG10092 40929   NP_649745 40
N.crassa NCU08195 3875448   XP_959285 40
A.gambiae AgaP_AGAP010086 1279516   XP_319244 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)