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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. RIMS1, Regulating synaptic membrane exocytosis 1
Sequence ID:NM_014989
NM_001168407
NM_001168410
NM_001168408
NM_001168409
NM_001168411
RefSeqGene ID:NG_016209
Entrez Gene ID:22999
Ensembl ID:ENSG00000079841

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CONE-ROD DYSTROPHY 7 

Cytogenetic Location (from UniGene)

Cytogenetic Location:6q12-q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 72960116 - 73110416

 Exon Info From UCSC:
NM_014989
NM_001168407
NM_001168410
NM_001168408
NM_001168409
NM_001168411

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860502Full LengthBC151853regulating synaptic membrane exocytosis 1
8862556Full LengthBC152435regulating synaptic membrane exocytosis 1
100069176Full LengthBC172482regulating synaptic membrane exocytosis 1
5275424IncompleteBC036608regulating synaptic membrane exocytosis 1
100062904BC156411regulating synaptic membrane exocytosis 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055804  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001168407 NP_001161879    
NM_001168408 NP_001161880    
NM_001168409 NP_001161881    
NM_001168410 NP_001161882    
NM_001168411 NP_001161883    
NM_014989 NP_055804 Q86UR5 C2
PDZ

Related Sequences

 
mRNAGenPeptSwissProt
AF263305 AAG23162 Q86UR5
AF263306 AAG23163 Q86UR5
AF263307 AAG23164 Q86UR5
AF263308 AAG23165 Q86UR5
AF263309 AAG23166 Q86UR5
AF263310 AAG23167 Q86UR5
BC036608 AAH36608 Q3ZCW0
BC151853 AAI51854 Q86UR5
BC152435 AAI52436 Q86UR5
BC156411 AAI56412  
BC172482 AAI72482  
AY190519 AAO38848 Q86UR5
AB002338 BAA20798 Q86UR5
AB045726 BAB87121 Q86UR5
AB051866 BAB87242 Q86UR5
AK293828 BAH11605 B7Z1R9
AK294868 BAH11906 B7Z2M0
AK295001 BAH11945 B7Z2Q9
AK295177 BAH12000 B7Z2W4
AK296303 BAH12309 Q86UR5
AK300503 BAH13295 B7Z6K9
AK300853 BAH13358 B7Z6S2
AK302571 BAH13748 B7Z7W2
AK316108 BAH14479 B7Z9Z3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RIMS1 NP_055804 R.norvegicus Rims1 84556   NP_439894 87
M.musculus Rims1 116837 Gene Info NP_001012641 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)