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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SOCS2, suppressor of cytokine signaling 2
Sequence ID:NM_001270467
NM_001270468
NM_001270469
NM_001270470
NM_001270471
NM_003877
Entrez Gene ID:8835
Ensembl ID:ENSG00000120833

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12q

Chromosomal Position (from UCSC)

Chromosomal Position:12: 93966635 - 93969024

Transcript StartTranscript EndChromosomal Start Chromosomal End
13779396359793963973
3787299396646093966811
73022109396849793969977

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4277425Full LengthBC010399suppressor of cytokine signaling 2
30346134IncompleteBC070039suppressor of cytokine signaling 2

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001270467 NP_001257396    
NM_001270468 NP_001257397    
NM_001270469 NP_001257398    
NM_001270470 NP_001257399    
NM_001270471 NP_001257400    
NM_003877 NP_003868 O14508 SH2
SOCS_box

Related Sequences

 
mRNAGenPeptSwissProt
AF037989 AAC34745 O14508
AF020590 AAC98896 O14508
BC010399 AAH10399 O14508
AB004903 BAA22429 O14508
AB006966 BAA22536 O14508
AK290546 BAF83235 O14508
AK313165 BAG35983 O14508
AK297662 BAG60027 B4DMW5
AB451318 BAG70132 B5BU82

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SOCS2 NP_003868 M.musculus Socs2 216233 Gene Info NP_001162126 94
R.norvegicus Socs2 84607   NP_478115 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)