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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. TRERF1, transcriptional regulating factor 1
Sequence ID:NM_033502
Entrez Gene ID:55809
Ensembl ID:ENSG00000124496

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.1-p12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 42193435 - 42194982

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100061587BC156203transcriptional regulating factor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_277037  

Protein Infomation

NM_033502 NP_277037 Q96PN7 zf-C2H2

Related Sequences

BC156203 AAI56204  
AF297872 AAL01653 Q96PN7
AF111801 AAL39003 Q8WYI6
AK002096 BAA92082 Q96PN7
AK127493 BAG54514 B3KXK2
AJ277275 CAB88206 Q96PN7
AJ277276 CAB88207 Q96PN7
AM404259 CAL49295 Q96PN7
AM404182 CAL49296 Q05GC8
AM404183 CAL49297 Q96PN7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens TRERF1 NP_277037 M.musculus Trerf1 224829 Gene Info NP_766210 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)