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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TFEB, Transcription factor EB
Sequence ID:NM_007162
NM_001167827
Entrez Gene ID:7942
Ensembl ID:ENSG00000112561

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 41651715 - 41703997

 Exon Info From UCSC:
NM_007162
NM_001167827

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5180066Full LengthBC032448transcription factor EB
3944945IncompleteBC006225transcription factor EB

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009093  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001167827 NP_001161299    
NM_007162 NP_009093 P19484 HLH

Related Sequences

 
mRNAGenPeptSwissProt
M33782 AAA36730 P19484
BC006225 AAH06225 P19484
BC032448 AAH32448 P19484
EU446667 ABZ92196  
AK095061 BAG52979 B1AKB4
AK298390 BAG60625 B4DPL3
AJ608787 CAE77672 Q709A8
AJ608788 CAE77673 Q709B0
AJ608789 CAE77674 Q709B0
AJ608790 CAE77675 Q709A9
AJ608791 CAE77676 Q709A8
AJ608792 CAE77677 Q709B0
AJ608793 CAE77678 Q86WB1
AJ608794 CAE77679 Q709A5
AJ608786 CAE77681 P19484

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TFEB NP_001161299 M.musculus Tfeb 21425 Gene Info NP_035679 94
R.norvegicus Tfeb 316214   NP_001020878 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)