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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RNF8, Ring finger protein 8, E3 ubiquitin protein ligase
Sequence ID:NM_003958
NM_183078
Entrez Gene ID:9025
Ensembl ID:ENSG00000112130

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 37321828 - 37362509

 Exon Info From UCSC:
NM_003958
NM_183078

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3028746Full LengthBC007517ring finger protein 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_898901  NP_003949  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003958 NP_003949 O76064 zf-C3HC4
FHA
NM_183078 NP_898901   FHA

Related Sequences

 
mRNAGenPeptSwissProt
BC007517 AAH07517 O76064
BT007446 AAP36114 O76064
AF334675 AAQ14887 O76064
DQ890737 ABM81663  
DQ893909 ABM84835  
AB014546 BAA31621 O76064
AK222765 BAD96485 O76064
AK298319 BAG60572 O76064

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RNF8 NP_003949 R.norvegicus Rnf8 361815   NP_001020898 73
M.musculus Rnf8 58230 Gene Info NP_067394 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)