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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TNXB, tenascin XB
Sequence ID:NM_019105
NM_032470
RefSeqGene ID:NG_008337
Entrez Gene ID:7148
Ensembl ID:ENSG00000168477

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
EHLERS-DANLOS SYNDROME,TYPE IIICOL3A1

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 32008930 - 32015756

 Exon Info From UCSC:
NM_019105
NM_032470

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6571962IncompleteBC071883tenascin XB

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_115859  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019105 NP_061978    
NM_032470 NP_115859   fn3
Fibrinogen_C

Related Sequences

 
mRNAGenPeptSwissProt
M25813 AAA35884 P22105
U24488 AAB41287 P22105
U52699 AAC50880  
U52700 AAC50882 Q7KYV5
BC033740 AAH33740 P22105
BC071883 AAH71883 Q6IPK3
BC125114 AAI25115 P22105
BC125115 AAI25116 P22105
BC130037 AAI30038 P22105
EU219621 ACA14133 B6RHJ5
JF432266 ADZ15483  
AB209012 BAD92249 P22105
X71923 CAA50739 P22105
Y13782 CAA74109 P22105
Y17865 CAA76899 O95680
Y17866 CAA76900 Q9Y464
Y17867 CAA76901 O95681
Y17868 CAA76902 O95682

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TNXB NP_061978 M.musculus Tnxb 81877 Gene Info NP_112453 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)