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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. DFFA, DNA fragmentation factor, 45kDa, alpha polypeptide
Sequence ID:NM_004401
RefSeqGene ID:NG_029098
Entrez Gene ID:1676
Ensembl ID:ENSG00000160049

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.3-p36.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 10522524 - 10532545

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3505817Full LengthBC000037DNA fragmentation factor, 45kDa, alpha polypeptide
4292811Full LengthBC007112DNA fragmentation factor, 45kDa, alpha polypeptide
4299734Full LengthBC007721DNA fragmentation factor, 45kDa, alpha polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_998731  NP_004392  

Protein Infomation

NM_004401 NP_004392 O00273 CIDE-N
NM_213566 NP_998731   CIDE-N

Related Sequences

U91985 AAC51249 O00273
AF087573 AAD32953 O00273
AF103799 AAF02419 O00273
BC000037 AAH00037 O00273
BC007112 AAH07112 O00273
BC007721 AAH07721 O00273
BT006980 AAP35626 O00273
AK222546 BAD96266 Q53HN4
AK313317 BAG36122 O00273

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens DFFA NP_004392 R.norvegicus Dffa 114214   NP_446131 79
M.musculus Dffa 13347 Gene Info NP_001020467 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta