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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. OLFM3, olfactomedin 3
Sequence ID:NM_058170
Entrez Gene ID:118427
Ensembl ID:ENSG00000118733

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1p22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 102269042 - 102312529

NM_058170 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12345102268126102270470
23462452102271631102271737
24532672102290581102290800
26732828102296227102296382
28292975102302434102302580
29763462102462303102462789

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4812035Full LengthBC022531olfactomedin 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_477518  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_058170 NP_477518   OLF

Related Sequences

 
mRNAGenPeptSwissProt
BC022531 AAH22531 Q96PB7
AF397392 AAK97473 Q96PB7
Q6IMJ0
AF397393 AAK97474 Q96PB7
AF397394 AAK97475 Q96PB7
AF397395 AAK97476 Q96PB7
AF397396 AAK97477 Q96PB7
AF397397 AAK97478 Q96PB7
AY358722 AAQ89084 Q96PB7
Q6IMJ0
EU176509 ABW03310  
AK095551 BAG53081 B3KTG9
AK095724 BAG53115 Q96PB7
AK300870 BAH13362 Q6IMJ0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OLFM3 NP_477518 R.norvegicus Olfm3 252920   NP_665720 96
M.musculus Olfm3 229759 Gene Info NP_694797 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)