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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ZNF354A, zinc finger protein 354A
Sequence ID:NM_005649
Entrez Gene ID:6940
Ensembl ID:ENSG00000169131

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q35.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 178138594 - 178157703

NM_005649 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
102101178138530178140621
21022197178152376178152471
21982324178153999178154125
23252408178155990178156073
24092555178157556178157702

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5312219Full LengthBC047105zinc finger protein 354A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005640  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005649 NP_005640 O60765 zf-C2H2
KRAB

Related Sequences

 
mRNAGenPeptSwissProt
AF116030 AAD05335 O60765
BC047105 AAH47105 Q86Y64
EU446906 ABZ92435  
JF432337 ADZ15554  
D89928 BAA25182 O60765
AK290711 BAF83400 A8K3U6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ZNF354A NP_005640 M.musculus Zfp354a 21408 Gene Info NP_033355 88
R.norvegicus Zfp354a 24522   NP_434685 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)