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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CLTB, clathrin, light chain B
Sequence ID:NM_001834
NM_007097
NR_045724
Entrez Gene ID:1212
Ensembl ID:ENSG00000175416

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q35Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 175819649 - 175843540

 Exon Info From UCSC:
NM_001834
NM_007097

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3538261Full LengthBC006457clathrin, light chain (Lcb)
4299637Full LengthBC006332clathrin, light chain (Lcb)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001825  NP_009028  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001834 NP_001825   Clathrin_lg_ch
NM_007097 NP_009028 P09497 Clathrin_lg_ch

Related Sequences

 
mRNAGenPeptSwissProt
M20469 AAA51818 P09497
M20470 AAA59506 P09497
BC006332 AAH06332 P09497
BC006457 AAH06457 P09497
BT007028 AAP35675 P09497
AK300200 BAG61971 B4DTF9
CR536577 CAG38814 P09497

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CLTB NP_001825 M.musculus Cltb 74325 Gene Info NP_083146 95
R.norvegicus Cltb 116561   NP_446287 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta